On sparse Fisher discriminant method for microarray data analysis
نویسندگان
چکیده
منابع مشابه
On sparse Fisher discriminant method for microarray data analysis
One of the applications of the discriminant analysis on microarray data is to classify patient and normal samples based on gene expression values. The analysis is especially important in medical trials and diagnosis of cancer subtypes. The main contribution of this paper is to propose a simple Fisher-type discriminant method on gene selection in microarray data. In the new algorithm, we calcula...
متن کاملNon-Sparse Multiple Kernel Fisher Discriminant Analysis
Sparsity-inducing multiple kernel Fisher discriminant analysis (MK-FDA) has been studied in the literature. Building on recent advances in non-sparse multiple kernel learning (MKL), we propose a non-sparse version of MK-FDA, which imposes a general lp norm regularisation on the kernel weights. We formulate the associated optimisation problem as a semi-infinite program (SIP), and adapt an iterat...
متن کاملSparse Fisher Discriminant Analysis for Computer Aided Detection
We describe a method for sparse feature selection for a class of problems motivated by our work in Computer-Aided Detection (CAD) systems for identifying structures of interest in medical images. Typical CAD data sets for classification are large (several thousand candidates) and unbalanced (significantly fewer than 1% of the candidates are ”positive”). To be accepted by physicians, CAD systems...
متن کاملGene Identification from Microarray Data for Diagnosis of Acute Myeloid and Lymphoblastic Leukemia Using a Sparse Gene Selection Method
Background: Microarray experiments can simultaneously determine the expression of thousands of genes. Identification of potential genes from microarray data for diagnosis of cancer is important. This study aimed to identify genes for the diagnosis of acute myeloid and lymphoblastic leukemia using a sparse feature selection method. Materials and Methods: In this descriptive study, the expressio...
متن کاملFisher Linear Discriminant Analysis
Fisher Linear Discriminant Analysis (also called Linear Discriminant Analysis(LDA)) are methods used in statistics, pattern recognition and machine learning to find a linear combination of features which characterizes or separates two or more classes of objects or events. The resulting combination may be used as a linear classifier, or, more commonly, for dimensionality reduction before later c...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Bioinformation
سال: 2007
ISSN: 0973-8894,0973-2063
DOI: 10.6026/97320630002230